RetrogeneDB ID: | retro_pvam_122 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_1518:22463..22772(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSPVAG00000003253 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 70.87 % |
Parental protein coverage: | 71.03 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | NVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLD |
NV....I.K...V.V..GHYKG.QIGKVVQVYRKKYVIY.E.VQ.EKA..T.VHVGIHPSKVV.T.L.LD | |
Retrocopy | NVQPVLI*KNSKV*VMQGHYKGKQIGKVVQVYRKKYVIYAE*VQWEKATDTPVHVGIHPSKVVTTKLRLD |
Parental | KDRKKILERKAKSRQVGKEKGKYKEELIEKMQE |
KDR.K.LE..AKSRQVGKE.GK.K.E..EKMQE | |
Retrocopy | KDRTKALECRAKSRQVGKERGKCKQETFEKMQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |