Parental gene:

RPL26L1, ENSMMUG00000003070

Aliases:None
Description:ribosomal protein L26-like 1 [Source:RefSeq peptide;Acc:NP_001253942]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:169360118..169368604(+)


>ENSMMUG00000003070
ATGAAGTTCAATCCCTTCGTGACGTCGGACCGCAGCAAAAACCGCAAACGTCACTTCAATGCCCCCTCACACGTGCGCAG
GAAGATCATGTCATCCCCGCTCTCCAAGGAGCTGCGGCAGAAGTACAATGTCCGCTCCATGCCCATCCGCAAGGACGACG
AGGTCCAGGTAGTTCGAGGACACTACAAAGGTCAGCAAATTGGCAAGGTAGTCCAGGTGTACAGAAAGAAATATGTCATC
TACATCGAGCGGGTGCAGCGTGAGAAGGCCAACGGCACAACCGTCCATGTGGGCATTCACCCGAGCAAGGTGGTTATCAC
CAGGCTAAAACTGGACAAGGATCGGAAAAAAATTCTTGAACGCAAAGCCAAGTCTCGACAAGTTGGAAAAGAGAAAGGCA
AATATAAGGAAGAACTTATTGAGAAAATGCAGGAATAA

Library Parental gene expression (RPM)
SRP007412_brain 20 .39 RPM
SRP007412_brain_prefrontal_cortex 27 .84 RPM
SRP007412_cerebellum 17 .37 RPM
SRP007412_heart 17 .49 RPM
SRP007412_kidney 19 .48 RPM
SRP007412_liver 22 .48 RPM
SRP007412_testis 80 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002289 ortholog_one2one 35 retrogenes
retro_dnov_1106, retro_dnov_1147, retro_dnov_1171, retro_dnov_1258, retro_dnov_1304, retro_dnov_1319, retro_dnov_1344, retro_dnov_1381, retro_dnov_1501, retro_dnov_1676, retro_dnov_1819, retro_dnov_1959, retro_dnov_2039, retro_dnov_2041, retro_dnov_2061, retro_dnov_2078, retro_dnov_2103, retro_dnov_2116, retro_dnov_2121, retro_dnov_2287, retro_dnov_2297, retro_dnov_2438, retro_dnov_2545, retro_dnov_2580, retro_dnov_2632, retro_dnov_300, retro_dnov_306, retro_dnov_467, retro_dnov_646, retro_dnov_666, retro_dnov_681, retro_dnov_760, retro_dnov_850, retro_dnov_970, retro_dnov_985,
Felis catus ENSFCAG00000026949 ortholog_one2one 1 retrogene
retro_fcat_524,
Homo sapiens ENSG00000037241 ortholog_one2one 2 retrogenes
retro_hsap_586, retro_hsap_837,
Latimeria chalumnae ENSLACG00000007599 ortholog_one2many 2 retrogenes
retro_lcha_5, retro_lcha_8,
Microcebus murinus ENSMICG00000011312 ortholog_one2one 10 retrogenes
retro_mmur_1020, retro_mmur_1144, retro_mmur_313, retro_mmur_327, retro_mmur_346, retro_mmur_412, retro_mmur_471, retro_mmur_623, retro_mmur_72, retro_mmur_75,
Macaca mulatta ENSMMUG00000003448 within_species_paralog 22 retrogenes
retro_mmul_1117, retro_mmul_1361, retro_mmul_1398, retro_mmul_1497, retro_mmul_1710, retro_mmul_1773, retro_mmul_1899, retro_mmul_1986, retro_mmul_2052, retro_mmul_2163, retro_mmul_2332, retro_mmul_2344, retro_mmul_325, retro_mmul_360, retro_mmul_398, retro_mmul_405, retro_mmul_448, retro_mmul_548, retro_mmul_805, retro_mmul_903, retro_mmul_920, retro_mmul_992,
Oryctolagus cuniculus ENSOCUG00000006172 ortholog_one2one 4 retrogenes
retro_ocun_1015, retro_ocun_1224, retro_ocun_354, retro_ocun_845,
Procavia capensis ENSPCAG00000002246 ortholog_one2one 10 retrogenes
retro_pcap_137, retro_pcap_157, retro_pcap_188, retro_pcap_204, retro_pcap_337, retro_pcap_404, retro_pcap_419, retro_pcap_42, retro_pcap_422, retro_pcap_448,
Pteropus vampyrus ENSPVAG00000003253 ortholog_one2one 8 retrogenes
retro_pvam_1062, retro_pvam_1208, retro_pvam_122, retro_pvam_353, retro_pvam_688, retro_pvam_71, retro_pvam_769, retro_pvam_877,
Sus scrofa ENSSSCG00000016989 ortholog_one2one 3 retrogenes
retro_sscr_1104, retro_sscr_462, retro_sscr_685,
Ictidomys tridecemlineatus ENSSTOG00000026876 ortholog_one2one 1 retrogene
retro_itri_1141,
Tursiops truncatus ENSTTRG00000010624 ortholog_one2one 8 retrogenes
retro_ttru_1070, retro_ttru_1124, retro_ttru_1694, retro_ttru_1818, retro_ttru_364, retro_ttru_386, retro_ttru_474, retro_ttru_646,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_676 66.07 76.55
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Download FASTA sequences of all ENSMMUG00000003070 retrocopies