Parental gene:

RPL26L1, ENSFCAG00000026949

Aliases:None
Description:ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050]
Organism:Cat (Felis catus)
Coordinates:A1:176644443..176658576(-)


>ENSFCAG00000026949
ATGAAGTTCAACCCCTTCGTGACCTCGGACCGCAGCAAAAACCGCAAACGCCACTTCAATGCCCCCTCGCACGTGCGCAG
GAAGATCATGTCTTCCCCGCTCTCCAAGGAGCTGCGGCAGAAGTACAACGTCCGCTCCATGCCCATCCGCAAGGACGACG
AGGTCCAGGTGGTTCGAGGACACTACAAAGGTCAGCAAATAGGCAAGGTAGTCCAGGTGTACAGAAAAAAGTATGTCATC
TACATCGAGCGAGTGCAGCGTGAGAAGGCTAATGGTACAACTGTTCATGTGGGCATTCACCCCAGCAAGGTAGTTATCAC
CAGGCTAAAACTGGACAAAGACCGGAAAAAAATTCTTGAACGCAAAGCCAAATCTCGACAAGTTGGAAAAGAGAAAGGCA
AATATAAGGAAGAACTTATTGAGAAAATGCAGGAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 5 .46 RPM
SRP017611_kidney 12 .88 RPM
SRP017611_brain 13 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002289 ortholog_one2one 35 retrogenes
retro_dnov_1106, retro_dnov_1147, retro_dnov_1171, retro_dnov_1258, retro_dnov_1304, retro_dnov_1319, retro_dnov_1344, retro_dnov_1381, retro_dnov_1501, retro_dnov_1676, retro_dnov_1819, retro_dnov_1959, retro_dnov_2039, retro_dnov_2041, retro_dnov_2061, retro_dnov_2078, retro_dnov_2103, retro_dnov_2116, retro_dnov_2121, retro_dnov_2287, retro_dnov_2297, retro_dnov_2438, retro_dnov_2545, retro_dnov_2580, retro_dnov_2632, retro_dnov_300, retro_dnov_306, retro_dnov_467, retro_dnov_646, retro_dnov_666, retro_dnov_681, retro_dnov_760, retro_dnov_850, retro_dnov_970, retro_dnov_985,
Felis catus ENSFCAG00000011259 within_species_paralog 13 retrogenes
retro_fcat_1090, retro_fcat_1151, retro_fcat_1198, retro_fcat_1236, retro_fcat_1257, retro_fcat_1309, retro_fcat_1412, retro_fcat_1652, retro_fcat_1801, retro_fcat_1845, retro_fcat_1965, retro_fcat_497, retro_fcat_801,
Homo sapiens ENSG00000037241 ortholog_one2one 2 retrogenes
retro_hsap_586, retro_hsap_837,
Latimeria chalumnae ENSLACG00000007599 ortholog_many2many 2 retrogenes
retro_lcha_5, retro_lcha_8,
Microcebus murinus ENSMICG00000011312 ortholog_one2one 10 retrogenes
retro_mmur_1020, retro_mmur_1144, retro_mmur_313, retro_mmur_327, retro_mmur_346, retro_mmur_412, retro_mmur_471, retro_mmur_623, retro_mmur_72, retro_mmur_75,
Macaca mulatta ENSMMUG00000003070 ortholog_one2one 1 retrogene
retro_mmul_676,
Mustela putorius furo ENSMPUG00000012729 possible_ortholog 2 retrogenes
retro_mputfur_1624, retro_mputfur_190,
Oryctolagus cuniculus ENSOCUG00000006172 ortholog_one2one 4 retrogenes
retro_ocun_1015, retro_ocun_1224, retro_ocun_354, retro_ocun_845,
Procavia capensis ENSPCAG00000002246 ortholog_one2one 10 retrogenes
retro_pcap_137, retro_pcap_157, retro_pcap_188, retro_pcap_204, retro_pcap_337, retro_pcap_404, retro_pcap_419, retro_pcap_42, retro_pcap_422, retro_pcap_448,
Pteropus vampyrus ENSPVAG00000003253 ortholog_one2one 8 retrogenes
retro_pvam_1062, retro_pvam_1208, retro_pvam_122, retro_pvam_353, retro_pvam_688, retro_pvam_71, retro_pvam_769, retro_pvam_877,
Sus scrofa ENSSSCG00000016989 ortholog_one2one 3 retrogenes
retro_sscr_1104, retro_sscr_462, retro_sscr_685,
Ictidomys tridecemlineatus ENSSTOG00000026876 ortholog_one2one 1 retrogene
retro_itri_1141,
Tursiops truncatus ENSTTRG00000010624 ortholog_one2one 8 retrogenes
retro_ttru_1070, retro_ttru_1124, retro_ttru_1694, retro_ttru_1818, retro_ttru_364, retro_ttru_386, retro_ttru_474, retro_ttru_646,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_524 57.05 99.31
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Download FASTA sequences of all ENSFCAG00000026949 retrocopies