RetrogeneDB ID: | retro_pvam_877 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_14480:10861..11292(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSPVAG00000003253 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 75.86 % |
Parental protein coverage: | 99.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPF.TSD.SKN.K.HFN.PSHVRR.IM...LSK.L..KYNV.SMPI.KDDEVQ.VRGHYKGQQIG.V | |
Retrocopy | MKFNPFETSDPSKNCKHHFNDPSHVRRNIMLHHLSKVLWRKYNVCSMPIHKDDEVQMVRGHYKGQQIGNV |
Parental | VQVYRKKYVIYIERVQREKANGTTVH-VGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEEL |
V.VYRK.YVIYI.RVQREKA.GTTV...GIHP..VVIT.LKLDKDRK.....KA.SRQV.KEKGKYKEE. | |
Retrocopy | VWVYRKEYVIYIKRVQREKAKGTTVQ<MGIHPCNVVITKLKLDKDRKEKFKCKANSRQVRKEKGKYKEEI |
Parental | IEKMQ |
I.KMQ | |
Retrocopy | IAKMQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |