RetrogeneDB ID: | retro_ttru_1070 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_102006:53903..54336(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26L1 | ||
Ensembl ID: | ENSTTRG00000010624 | ||
Aliases: | None | ||
Description: | ribosomal protein L26-like 1 [Source:HGNC Symbol;Acc:17050] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MKFNPFVTSDRSKNRK-RHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKFNPFVT.D..KN.K..HFN..SH..RKIMS.PLSKELRQKYNV..M.I.KDD.VQVV.GHYKGQQIGK | |
Retrocopy | MKFNPFVTCDQRKNHK<KHFNSLSHFHRKIMSFPLSKELRQKYNVQPMSI*KDDDVQVV*GHYKGQQIGK |
Parental | VVQVYRKKYVIYIERVQREK-ANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEE |
.VQVYRKK..IY.ERVQ.EK.A.GTTV.VGI.PSKV.I.RLK..K..KKI...KAKS.QVG.EKG...EE | |
Retrocopy | AVQVYRKKCIIYTERVQQEK<ASGTTVRVGIQPSKVIINRLKVNKGCKKISG*KAKSCQVGEEKGLKREE |
Parental | LIEKMQE |
.IEKM.E | |
Retrocopy | TIEKMWE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |