RetrogeneDB ID: | retro_tbel_2765 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_118695:91860..92249(-) | ||
Located in intron of: | ENSTBEG00000007365 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G1 | ||
Ensembl ID: | ENSTBEG00000003575 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841] |
Percent Identity: | 83.7 % |
Parental protein coverage: | 98.53 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QTTGALLISPALIRCCTRGLLRPVSASFLSRPDNASKQPSSSSSPLQVTRREF-QTSVVSRDIDTAAKFI |
Q.TGALLISPALI.CCTRGLLRPVSASF.SRP.NASKQPSSSSSPLQVTRREF.QTS..SRDIDTAAK.. | |
Retrocopy | QSTGALLISPALICCCTRGLLRPVSASFPSRPANASKQPSSSSSPLQVTRREF<QTSILSRDIDTAAKCF |
Parental | GAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA |
GAGAAT..VAGSGAGIGTVFGSL.IGYAR.PSLK.QL.SYAILGFA.....GLFC.MV.FLILFA | |
Retrocopy | GAGAATIAVAGSGAGIGTVFGSLTIGYARDPSLKEQLISYAILGFA----TGLFC*MVTFLILFA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |