RetrogeneDB ID: | retro_ggor_528 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 10:89534284..89534629(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G1 | ||
Ensembl ID: | ENSGGOG00000001626 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.21 % |
Parental protein coverage: | 85.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MQTAGPLFISPALIRCCTRGLIRPASASFLNSPVNSSKQPSYSNFPLQVARREFQTSVVSRDIDTAAKFI |
MQT.G.L.ISPAL.RCCTRGLIRP.SASFLNSP.NSSKQPSYS..PLQVAR.EF.TSVVS..IDTAAK.I | |
Retrocopy | MQT-GALLISPALMRCCTRGLIRPVSASFLNSPENSSKQPSYSSSPLQVARQEF*TSVVSWNIDTAAKLI |
Parental | GAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFA |
GAGAATV.VAGSGAGIGTVFGSLIIGYARNPSLKQQ.FSY.ILGFA | |
Retrocopy | GAGAATVSVAGSGAGIGTVFGSLIIGYARNPSLKQQFFSYVILGFA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .10 RPM | 41 .77 RPM |
SRP007412_cerebellum | 0 .00 RPM | 20 .68 RPM |
SRP007412_heart | 0 .13 RPM | 115 .54 RPM |
SRP007412_kidney | 0 .04 RPM | 61 .09 RPM |
SRP007412_liver | 0 .05 RPM | 38 .51 RPM |
SRP007412_testis | 0 .00 RPM | 32 .22 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_597 |
Pan troglodytes | retro_ptro_440 |
Pongo abelii | retro_pabe_593 |