RetrogeneDB ID: | retro_tbel_3270 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_135487:74613..74934(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G1 | ||
Ensembl ID: | ENSTBEG00000003575 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841] |
Percent Identity: | 69.91 % |
Parental protein coverage: | 80.15 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MQTTGALLISPALIRCC-TRGLLRPVSAS-FLSRPDNASKQPSSSSSPLQVTRREFQTSVVSRDIDTAAK |
.QTTGAL..SP.LI.CC...GLLRP.SA..FLSRPD.A.KQPSSSS.PLQVT...FQTS.VS.DIDTAAK | |
Retrocopy | LQTTGALFTSPDLI-CC>SKGLLRPASAP>FLSRPDKALKQPSSSSCPLQVTKQKFQTSTVSQDIDTAAK |
Parental | FIGAGA-ATVGVAGSG-AGIGTVFGSLIIGYARNPSLKQQLFS |
FIG.GA.ATVGVAGSG.AGIG..FGS....YARNP......FS | |
Retrocopy | FIGTGA<ATVGVAGSG<AGIGMLFGSSTC-YARNPVFSGEFFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |