RetrogeneDB ID: | retro_tbel_3540 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_144120:73458..73694(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G1 | ||
Ensembl ID: | ENSTBEG00000003575 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841] |
Percent Identity: | 62.5 % |
Parental protein coverage: | 58.09 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQTTGALLISPALIRCCTRGLLRPVSASFLSRPDNASKQPSSSSSPLQVTRREF-QTSVVSRDIDTAAKF |
MQ.TGALLI.PA.I.C.TRGLLRPVSASFL..P..ASK.P.S.SS.LQV...EF.QTS..S.D.DT.A.F | |
Retrocopy | MQITGALLIPPAQICCYTRGLLRPVSASFLTGPEKASKRPFSCSSSLQVIWPEF<QTSAFSWDPDTPAIF |
Parental | IGAGAATVGV |
IG......G. | |
Retrocopy | IGEAGSGAGI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |