Parental gene: | ATP5G1, ENSG00000159199 |
| Aliases: | ATP5G1, ATP5A, ATP5G |
| Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:46970126..46973233(+) |
>ENSG00000159199
ATGCAGACCGCCGGGGCATTATTCATTTCTCCAGCTCTGATCCGCTGTTGTACCAGGGGTCTAATCAGGCCTGTGTCTGC
CTCCTTCTTGAATAGCCCAGTGAATTCATCTAAACAGCCTTCCTACAGCAACTTCCCACTCCAGGTGGCCAGACGGGAGT
TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCAGCCACAGTTGGTGTGGCT
GGTTCAGGGGCTGGCATTGGAACCGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGAACCCGTCTCTCAAGCAGCAGCT
CTTCTCCTATGCCATTCTTGGCTTTGCCCTGTCTGAGGCCATGGGGCTTTTCTGTTTGATGGTCGCCTTCCTCATCCTCT
TCGCCATGTGA
ATGCAGACCGCCGGGGCATTATTCATTTCTCCAGCTCTGATCCGCTGTTGTACCAGGGGTCTAATCAGGCCTGTGTCTGC
CTCCTTCTTGAATAGCCCAGTGAATTCATCTAAACAGCCTTCCTACAGCAACTTCCCACTCCAGGTGGCCAGACGGGAGT
TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCAGCCACAGTTGGTGTGGCT
GGTTCAGGGGCTGGCATTGGAACCGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGAACCCGTCTCTCAAGCAGCAGCT
CTTCTCCTATGCCATTCTTGGCTTTGCCCTGTCTGAGGCCATGGGGCTTTTCTGTTTGATGGTCGCCTTCCTCATCCTCT
TCGCCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 31 .83 RPM |
| bodymap2_lung | 16 .75 RPM |
| bodymap2_breast | 17 .45 RPM |
| bodymap2_adipose | 15 .84 RPM |
| bodymap2_adrenal | 32 .22 RPM |
| bodymap2_skeletal_muscle | 33 .30 RPM |
| bodymap2_thyroid | 46 .25 RPM |
| bodymap2_prostate | 31 .18 RPM |
| bodymap2_colon | 24 .11 RPM |
| bodymap2_testis | 19 .97 RPM |
| bodymap2_brain | 30 .03 RPM |
| bodymap2_heart | 111 .15 RPM |
| bodymap2_white_blood_cells | 17 .15 RPM |
| bodymap2_lymph_node | 20 .56 RPM |
| bodymap2_ovary | 23 .09 RPM |
| bodymap2_kidney | 68 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000006341 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016880 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007352 | ortholog_one2one | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000009017 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000019908 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000002344 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000135390 | within_species_paralog | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001626 | ortholog_one2one | 8 retrogenes | |
| Loxodonta africana | ENSLAFG00000004537 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000005744 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011738 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000013395 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015341 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002718 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000008909 | ortholog_one2one | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000009364 | ortholog_one2one | 8 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007235 | possible_ortholog | 5 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013404 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003575 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_597 | 86.21 | 85.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_686 | 83.09 | 98.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1054 | 84.56 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1234 | 83.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_1397 | 84.56 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_1464 | 72.92 | 69.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_2844 | 74.36 | 57.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_2882 | 81.63 | 71.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000159199 retrocopies