RetrogeneDB ID: | retro_tbel_4002 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_5270:85453..85861(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G1 | ||
Ensembl ID: | ENSTBEG00000003575 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841] |
Percent Identity: | 88.97 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQTTGALLISPALIRCCTRGLLRPVSASFLSRPDNASKQPSSSSSPLQVTRREFQTSVVSRDIDTAAKFI |
.QTTGALLIS.ALI.CCTR.L.RPVSASFLS.P.NASKQPS.SSSPLQVTR.EFQTSVVS.DIDTAAKFI | |
Retrocopy | VQTTGALLISRALICCCTRSLRRPVSASFLSKPENASKQPSASSSPLQVTRQEFQTSVVSQDIDTAAKFI |
Parental | GAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
GAGAAT.GVAGSGAGI.TVFGSLIIGYARNPSLKQQLF.YAI.GFALSEAMGLFCLMVAFLILFA. | |
Retrocopy | GAGAATIGVAGSGAGIVTVFGSLIIGYARNPSLKQQLFFYAIWGFALSEAMGLFCLMVAFLILFAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |