Parental gene:

RPS8, ENSLAFG00000027596

Aliases:None
Description:40S ribosomal protein S8 [Source:UniProtKB/TrEMBL;Acc:G3UCL9]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_34:24828823..24831556(+)


>ENSLAFG00000027596
AGCTTTGCGTTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGCAAGACCGG
GGGCAAGAGGAAGCCGTACCACAAGAAGCGGAAGTATGAGCTGGGACGCCCGGCTGCCAACACTAAGATCGGTCCCCGCC
GCATACACACAGTTCGTGTAAGAGGAGGCAACAAGAAGTACCGGGCCCTAAGGCTGGATGTGGGGAACTTTTCCTGGGGC
TCTGAGTGTTGTACTCGAAAAACAAGGATCATCGATGTTGTGTACAATGCATCCAATAATGAGCTGGTCCGCACCAAGAC
CCTGGTGAAGAACTGCATCGTGCTCATTGACAGCACACCGTACCGGCAGTGGTACGAGTCCCACTATGCACTGCCCCTGG
GCCGCAAGAAGGGGGCCAAACTGACTCCTGAGGAGGAAGAGATTTTAAACAAAAAGCGATCAAAGAAAATTCAGAAAAAA
TACGATGAAAGGAAAAAGAATGCAAAAATCAGCAGTCTTCTGGAGGAGCAGTTCCAGCAGGGCAAGCTTCTTGCGTGTAT
CGCTTCGAGGCCAGGCCAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGGGCAAGGAGCTGGAGTTCTATCTGAGGAAAA
TCAAGGCCCGGAAAGGCAAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015697 ortholog_one2one 1 retrogene
retro_acar_124,
Choloepus hoffmanni ENSCHOG00000008785 ortholog_one2one 10 retrogenes
retro_chof_1197, retro_chof_1258, retro_chof_1466, retro_chof_1638, retro_chof_2066, retro_chof_2617, retro_chof_2633, retro_chof_274, retro_chof_331, retro_chof_951,
Callithrix jacchus ENSCJAG00000004197 ortholog_one2many 5 retrogenes
retro_cjac_1068, retro_cjac_181, retro_cjac_3138, retro_cjac_6, retro_cjac_951,
Dipodomys ordii ENSDORG00000009287 possible_ortholog 1 retrogene
retro_dord_429,
Felis catus ENSFCAG00000022996 possible_ortholog 4 retrogenes
retro_fcat_1222, retro_fcat_200, retro_fcat_456, retro_fcat_962,
Gorilla gorilla ENSGGOG00000005645 possible_ortholog 5 retrogenes
retro_ggor_1127, retro_ggor_1170, retro_ggor_1357, retro_ggor_1465, retro_ggor_556,
Myotis lucifugus ENSMLUG00000001559 possible_ortholog 30 retrogenes
retro_mluc_1114, retro_mluc_1132, retro_mluc_1165, retro_mluc_1277, retro_mluc_1288, retro_mluc_1418, retro_mluc_1467, retro_mluc_1476, retro_mluc_1486, retro_mluc_1634, retro_mluc_1656, retro_mluc_1689, retro_mluc_1808, retro_mluc_1911, retro_mluc_1938, retro_mluc_2043, retro_mluc_2055, retro_mluc_2085, retro_mluc_2111, retro_mluc_2153, retro_mluc_2182, retro_mluc_2209, retro_mluc_2414, retro_mluc_460, retro_mluc_662, retro_mluc_730, retro_mluc_773, retro_mluc_820, retro_mluc_821, retro_mluc_906,
Macaca mulatta ENSMMUG00000015270 ortholog_one2many 2 retrogenes
retro_mmul_275, retro_mmul_70,
Monodelphis domestica ENSMODG00000028389 ortholog_one2one 1 retrogene
retro_mdom_998,
Mus musculus ENSMUSG00000047675 ortholog_one2one 33 retrogenes
retro_mmus_1003, retro_mmus_1067, retro_mmus_1184, retro_mmus_1694, retro_mmus_1755, retro_mmus_1796, retro_mmus_2001, retro_mmus_2002, retro_mmus_2003, retro_mmus_2031, retro_mmus_2132, retro_mmus_2173, retro_mmus_2264, retro_mmus_2732, retro_mmus_2772, retro_mmus_2847, retro_mmus_2861, retro_mmus_293, retro_mmus_2956, retro_mmus_2998, retro_mmus_3018, retro_mmus_3052, retro_mmus_3057, retro_mmus_3279, retro_mmus_3307, retro_mmus_3521, retro_mmus_364, retro_mmus_392, retro_mmus_548, retro_mmus_559, retro_mmus_596, retro_mmus_646, retro_mmus_876,
Nomascus leucogenys ENSNLEG00000014147 possible_ortholog 1 retrogene
retro_nleu_34,
Oryctolagus cuniculus ENSOCUG00000012476 possible_ortholog 1 retrogene
retro_ocun_168,
Otolemur garnettii ENSOGAG00000006922 possible_ortholog 16 retrogenes
retro_ogar_1156, retro_ogar_1746, retro_ogar_1895, retro_ogar_2501, retro_ogar_2529, retro_ogar_2556, retro_ogar_2699, retro_ogar_2723, retro_ogar_2947, retro_ogar_308, retro_ogar_3291, retro_ogar_3436, retro_ogar_394, retro_ogar_521, retro_ogar_730, retro_ogar_805,
Pongo abelii ENSPPYG00000001426 ortholog_one2one 1 retrogene
retro_pabe_147,
Rattus norvegicus ENSRNOG00000018768 ortholog_one2one 2 retrogenes
retro_rnor_222, retro_rnor_235,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_531 73.38 69.09
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2. retro_lafr_647 67.05 77.27
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3. retro_lafr_904 75.38 58.18
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Download FASTA sequences of all ENSLAFG00000027596 retrocopies