RetrogeneDB ID: | retro_chof_1466 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_3010:3566..3974(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSCHOG00000008785 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 74.26 % |
Parental protein coverage: | 98.55 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LSSQRLTMGITLDNRHKRRKTGGKRKPYLKKRKYELGIPSANTXXXXXXXXXXGVRGGNRKYRALKWDVE |
L.SQRL.MGI..DN.HK.R.TGGKRKPY.KKR.YELG.P.ANT...........V.GGNRKY.A...DV. | |
Retrocopy | LFSQRLAMGISQDNWHKCRNTGGKRKPYHKKREYELGRPAANTKIGPHHIHTVRV*GGNRKYPAMRLDVG |
Parental | DFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKL |
..SWGSECCT.KTRII.VVY.ASNNELVRTKTLVKNCIVLIDST.Y.QWYESHYALPLGRKKGAKL | |
Retrocopy | NCSWGSECCTLKTRIIGVVYSASNNELVRTKTLVKNCIVLIDSTLYWQWYESHYALPLGRKKGAKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |