RetrogeneDB ID: | retro_chof_951 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_17455:11620..11937(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSCHOG00000008785 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 64.49 % |
Parental protein coverage: | 76.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LSSQRLTM-GITLDNRHKRRKTGGKRKPYLKKRKYELGIPSANTXXXXXXXXXXGVRGGNRKYRALKWDV |
LSSQR..M.GI..D..HK.R.T.GKRKP...K.KYELG...A.T...........VRGGN.KY.AL..DV | |
Retrocopy | LSSQRHAM<GISWDDWHKSRRTRGKRKPNHRKQKYELGCLAAGTKIGPHHIHTVWVRGGNKKYPALRLDV |
Parental | EDFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKN |
..FSWGSECCTRKTRIIDVVYNAS.NELVRTKT.VK. | |
Retrocopy | GNFSWGSECCTRKTRIIDVVYNASDNELVRTKTPVKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |