Parental gene: | HMGN1, ENSPTRG00000031426 |
| Aliases: | None |
| Description: | High mobility group nucleosome binding domain 1 [Source:UniProtKB/TrEMBL;Acc:K7DN21] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 21:25420225..25426864(-) |
>ENSPTRG00000031426
ATGCCCAAGAGGAAGGTCAGCTCCGCCGAAGGCGCCGCCAAGGAAGAGCCCAAGAGGAGATCGGCGCGGTTGTCAGCTAA
ACCTCCTGCAAAAGTGGAAGCGAAGCCGAAAAAGGCAGCAGCGAAGGATAAATCTTCAGACAAAAAAGTGCAAACAAAAG
GGAAAAGGGGAGCAAAGGGAAAACAGGCCGAAGTGGCTAACCAAGAAACTAAAGAAGATTTACCTGCGGAAAACGGGGAA
ACGAAGACTGAGGAGAGTCCAGCCTCTGATGAAGCAGGAGAGAAAGAAGCCAAGTCTGATTAA
ATGCCCAAGAGGAAGGTCAGCTCCGCCGAAGGCGCCGCCAAGGAAGAGCCCAAGAGGAGATCGGCGCGGTTGTCAGCTAA
ACCTCCTGCAAAAGTGGAAGCGAAGCCGAAAAAGGCAGCAGCGAAGGATAAATCTTCAGACAAAAAAGTGCAAACAAAAG
GGAAAAGGGGAGCAAAGGGAAAACAGGCCGAAGTGGCTAACCAAGAAACTAAAGAAGATTTACCTGCGGAAAACGGGGAA
ACGAAGACTGAGGAGAGTCCAGCCTCTGATGAAGCAGGAGAGAAAGAAGCCAAGTCTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .15 RPM |
| SRP007412_cerebellum | 17 .57 RPM |
| SRP007412_heart | 17 .72 RPM |
| SRP007412_kidney | 44 .41 RPM |
| SRP007412_liver | 29 .20 RPM |
| SRP007412_testis | 38 .89 RPM |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_61 | 97.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_363 | 78.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_463 | 55.88 | 98.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_586 | 91.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_637 | 53.85 | 51.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_696 | 60.40 | 99.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_970 | 65.56 | 87.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_980 | 77.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_1256 | 72.73 | 64.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ptro_1299 | 77.78 | 90.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ptro_1301 | 58.00 | 99.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_ptro_1454 | 70.93 | 82.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_ptro_1556 | 95.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_ptro_1740 | 61.39 | 99.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_ptro_1821 | 60.71 | 53.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_ptro_1830 | 66.67 | 54.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_ptro_2058 | 86.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_ptro_2290 | 72.55 | 98.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_ptro_2559 | 86.96 | 91.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_ptro_2716 | 75.00 | 96.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_ptro_3119 | 87.50 | 95.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_ptro_3278 | 91.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000031426 retrocopies