RetrogeneDB ID: | retro_etel_303 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4996:33682..33998(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL35 | ||
Ensembl ID: | ENSETEG00000000876 | ||
Aliases: | None | ||
Description: | ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] |
Percent Identity: | 57.52 % |
Parental protein coverage: | 90.24 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | KKEELLKQLDDLKVELSQLRVAKVTGGA-ASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPL |
..EELLK.LD..KVELSQ..VAKVTGG..ASKLSKIRV.RKS.A...............K..KGK...PL | |
Retrocopy | RQEELLKRLDGPKVELSQQCVAKVTGGV<ASKLSKIRVARKSMAHHHQPHSEGELRQSSKGTKGK---PL |
Parental | DLRPKK-TRAMRRRLNKHEESLKTRKQQRKERLYPLRKYAVKA |
D.RP.K.TRAM..RLNK..ESL..RKQ.RKE.L..L..Y..KA | |
Retrocopy | DPRPRK<TRAMPHRLNK-PESLQPRKQWRKE-LSALHEYTFKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |