RetrogeneDB ID: | retro_itri_470 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393293.1:15317663..15317931(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS26 | ||
Ensembl ID: | ENSSTOG00000010559 | ||
Aliases: | None | ||
Description: | ribosomal protein S26 [Source:HGNC Symbol;Acc:10414] |
Percent Identity: | 68.48 % |
Parental protein coverage: | 78.95 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | NCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA-YVLPKLYVKLHYCVSCAIHSKVVRNRSREARK |
NC.R...KDKAIK.F.I.NI.EA.A.R..SEASVFD..YV..KLYV..H...SCAIHSKVVRN...EA.K | |
Retrocopy | NCPRYTLKDKAIKQFII*NILEATAIRNFSEASVFDT<YVPLKLYVTIHDGRSCAIHSKVVRNGPHEACK |
Parental | DRTPPPRFRP-AGAAPRPPPKP |
DRTPPP.FRP..GAAP.PPPKP | |
Retrocopy | DRTPPP*FRP<CGAAPQPPPKP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |