RetrogeneDB ID: | retro_mluc_810 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429777:5440896..5441811(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL3 | ||
Ensembl ID: | ENSMLUG00000023711 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.27 % |
Parental protein coverage: | 75.68 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | GLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQ |
GLRTFKTIFAEHISDECKRRFYK...KSKKKAFTKYCKKW.DDD.KKQLEKDFNSMKKYCQ.IRVIAHTQ | |
Retrocopy | GLRTFKTIFAEHISDECKRRFYKI*RKSKKKAFTKYCKKWKDDDSKKQLEKDFNSMKKYCQIIRVIAHTQ |
Parental | MRLLPLRQKKAHLMEIQVNGGT-VAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWH |
MRL.PLRQKKAHLMEIQVNGGT..AE.LDWA.ERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSR.H | |
Retrocopy | MRLPPLRQKKAHLMEIQVNGGT>EAETLDWAGERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSR*H |
Parental | TKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTD |
TKKLP.KTHRGL.KVACI.AWHPA.VAFSVA.AGQKGYH..TEINKKIY..GQGYLIKDGK.IKNNASTD | |
Retrocopy | TKKLPHKTHRGLQKVACIRAWHPAQVAFSVAQAGQKGYHPHTEINKKIYRFGQGYLIKDGK*IKNNASTD |
Parental | YDLSDKSIN-PLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG |
Y.LSDKSIN.PLGGFVH.GEVTNDFVMLKGCVVGTKK.VLTL.KSLL.QTK..ALEKIDLKFIDTTSKF. | |
Retrocopy | YYLSDKSIN<PLGGFVHHGEVTNDFVMLKGCVVGTKK*VLTLHKSLLMQTKGLALEKIDLKFIDTTSKFA |
Parental | HGRFQTMEEKKAFMGPLKKDRIAKEEG |
HG.FQ..EEKKAFMGPLKKDR..KEEG | |
Retrocopy | HGHFQIVEEKKAFMGPLKKDRVGKEEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |