RetrogeneDB ID: | retro_nleu_1159 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397283.1:18553765..18554255(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSNLEG00000000440 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.31 % |
Parental protein coverage: | 94.8 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTALVEK-EGIHVLDWPFDDGAPPSN |
VEVT.KNM.FLIT.N.TN.TLNKF..ELKKYGVT.I.RVCEA.Y.T.LVEK.EGIHVLDWPFDDGAP.SN | |
Retrocopy | VEVTQKNMKFLITYNQTNVTLNKFRKELKKYGVTIIIRVCEAIYGTTLVEK<EGIHVLDWPFDDGAPQSN |
Parental | QIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVA-LALIEGGMKYEDAVQFIRQKRRGAFNSKQLL |
.IVDDWL..VKIKFREEP..CIA.HCVAGL.RAP.LVA.LALIEGGMKYEDAVQFIRQ....AFNSK..L | |
Retrocopy | *IVDDWLCIVKIKFREEPS*CIAIHCVAGLQRAPILVA<LALIEGGMKYEDAVQFIRQNQHEAFNSKKFL |
Parental | YLEKYRPKMRLRFKDSNGHRNNCCIQ |
.L.KY.PK..L.FKDS.GHRNNCCIQ | |
Retrocopy | *LQKYPPKIQLLFKDSKGHRNNCCIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |