Parental gene:

RPL15, ENSPVAG00000001771

Aliases:None
Description:ribosomal protein L15 [Source:HGNC Symbol;Acc:10306]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_53:439994..441679(-)


>ENSPVAG00000001771
ATGGGTGCTTACAAGTACATCCAGGAGCTGTGGAGGAAGAAGCAGTCCGATGTCATGCGCTTTCTTCTTAGGGTGCGCTG
CTGGCAGTATCGCCAGCTCTCTGCACTCCACAGGGCCCCCCGCCCCACCCGGCCGGATAAAGCGCGCAGGCTGGGATACA
AGGCTAAGCAAGGTTATGTCATATATCGGATTCGTGTCCGCCGTGGTGGCCGCAAACGCCCAGTTCCTAAGGGTGCGACC
TATGGCAAGCCTGTCCATCACGGTGTTAACCAGCTAAAGTTTGCTCGAAGCCTTCAATCTGTTGCTGAGGAGCGAGCTGG
ACGCCACTGTGGGGCTCTGAGAGTCCTGAATTCTTACTGGGTTGGTGAAGATTCCACATACAAATTCTTTGAGGTTATTC
TCATTGATCCATTCCATAAAGCTATCAGACGGAATCCTGACACCCAGTGGATCACCAAACCAGTCCACAAGCACAGGGAG
ATGCGAGGGCTGACGTCTGCAGGCCGCAAGAGCCGTGGCCTCGGAAAGGGCCACAAGTTCCACCACACTATTGGTGGTTC
TCGTCGTGCAGCTTGGAGGAGGCGCAATACTCTCCAGCTTCATCGTTACCGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003497 ortholog_one2one 6 retrogenes
retro_amel_1281, retro_amel_1470, retro_amel_1519, retro_amel_516, retro_amel_548, retro_amel_712,
Callithrix jacchus ENSCJAG00000003810 ortholog_one2one 23 retrogenes
retro_cjac_1052, retro_cjac_1270, retro_cjac_1316, retro_cjac_1553, retro_cjac_1578, retro_cjac_1625, retro_cjac_1668, retro_cjac_1741, retro_cjac_2143, retro_cjac_2330, retro_cjac_2518, retro_cjac_2532, retro_cjac_2599, retro_cjac_2821, retro_cjac_2907, retro_cjac_3807, retro_cjac_4185, retro_cjac_506, retro_cjac_585, retro_cjac_712, retro_cjac_734, retro_cjac_783, retro_cjac_890,
Equus caballus ENSECAG00000010157 ortholog_one2one 1 retrogene
retro_ecab_38,
Procavia capensis ENSPCAG00000011995 possible_ortholog 1 retrogene
retro_pcap_265,
Pongo abelii ENSPPYG00000014065 ortholog_one2one 18 retrogenes
retro_pabe_1073, retro_pabe_1201, retro_pabe_1480, retro_pabe_1896, retro_pabe_2049, retro_pabe_2377, retro_pabe_2433, retro_pabe_2467, retro_pabe_2562, retro_pabe_3004, retro_pabe_3028, retro_pabe_3098, retro_pabe_561, retro_pabe_597, retro_pabe_642, retro_pabe_705, retro_pabe_801, retro_pabe_816,
Pan troglodytes ENSPTRG00000014695 ortholog_one2one 14 retrogenes
retro_ptro_1178, retro_ptro_1646, retro_ptro_1942, retro_ptro_2064, retro_ptro_2090, retro_ptro_2483, retro_ptro_2572, retro_ptro_435, retro_ptro_459, retro_ptro_550, retro_ptro_646, retro_ptro_663, retro_ptro_886, retro_ptro_991,
Tursiops truncatus ENSTTRG00000007244 ortholog_one2one 5 retrogenes
retro_ttru_1305, retro_ttru_1358, retro_ttru_280, retro_ttru_920, retro_ttru_987,
Vicugna pacos ENSVPAG00000008573 ortholog_one2one 2 retrogenes
retro_vpac_34, retro_vpac_522,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_83 76.54 77.94
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2. retro_pvam_176 78.54 99.02
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3. retro_pvam_338 70.17 87.25
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4. retro_pvam_397 77.17 88.73
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5. retro_pvam_538 82.93 100.00
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6. retro_pvam_634 62.41 63.73
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7. retro_pvam_766 72.11 70.59
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8. retro_pvam_1016 69.61 87.25
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9. retro_pvam_1067 72.20 98.53
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10. retro_pvam_1178 71.95 79.90
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11. retro_pvam_1280 79.90 99.51
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12. retro_pvam_1386 82.93 100.00
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13. retro_pvam_1422 72.26 75.00
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Download FASTA sequences of all ENSPVAG00000001771 retrocopies