RetrogeneDB ID: | retro_pcap_265 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_240515:429..993(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSPCAG00000011995 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.09 % |
Parental protein coverage: | 92.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPV |
S.VMRFLLRVRC.QYRQLSALHRA..PTRPDKARRLGYKAKQGYVIYRIRV.RGGRKRPVPKGAT.GKPV | |
Retrocopy | SAVMRFLLRVRCGQYRQLSALHRAAHPTRPDKARRLGYKAKQGYVIYRIRVCRGGRKRPVPKGATSGKPV |
Parental | NHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPV |
NHGVN.LKFARSLQSVAEERA.RHCGALRVLNSYWVGEDST.KFFEVILIDPFHKAIRRNPDTQWITK.V | |
Retrocopy | NHGVN*LKFARSLQSVAEERARRHCGALRVLNSYWVGEDSTHKFFEVILIDPFHKAIRRNPDTQWITKQV |
Parental | HKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAA-RRRNTLQLHRY |
HKHREMRGLTSAGR.SRGLGKGHKFHHTIGGSRRAA.RRRNTLQLH.Y | |
Retrocopy | HKHREMRGLTSAGRRSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHCY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |