RetrogeneDB ID: | retro_amel_121 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193550.1:540597..541059(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019431 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.12 % |
Parental protein coverage: | 98.72 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAPKPKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNK |
MAPK.KKE.P.PPKAEAKAKALKAKKAVL........KKIR.SPTF.RPKTL.LRRQPKYP.KSAPRRNK | |
Retrocopy | MAPKAKKENPDPPKAEAKAKALKAKKAVLNRRPQSQRKKIRMSPTFPRPKTLCLRRQPKYPPKSAPRRNK |
Parental | LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRL |
..H.AIIKFPLT.ES.M.KIED.NTLVFI.DVKANKHQIKQAVKKLYDID.AKVNTLIRP.GEKKAYV.L | |
Retrocopy | VNHNAIIKFPLTMESVM-KIED-NTLVFIMDVKANKHQIKQAVKKLYDIDGAKVNTLIRPNGEKKAYVQL |
Parental | APDYDALDVANKIG |
APDYDALDVANKIG | |
Retrocopy | APDYDALDVANKIG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |