RetrogeneDB ID: | retro_amel_901 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192724.1:772714..773172(-) | ||
Located in intron of: | ENSAMEG00000013114 | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000013122 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPKPKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNK |
M..K.KKE.P.PPKA.AK.KALK.K..VLK.VHSHK.K.I..SPTF..PK.L.L.RQPKYP.K.A.RRNK | |
Retrocopy | MELKVKKESPVPPKAKAKTKALKVKNTVLKKVHSHKRK-IFMSPTFQQPKILHLQRQPKYPWKRAARRNK |
Parental | LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIK-QAVKKLYDIDVAKVNTLIRPDGEKKAYVR |
LD.YAIIKFPLTT.SAMKK.EDNN.LVF.V.VKANKHQ.K...VKK....DVA.VNTLIRPDGEKKAYVR | |
Retrocopy | LDLYAIIKFPLTTKSAMKKREDNNMLVFTVHVKANKHQVK<MVVKKA--TDVARVNTLIRPDGEKKAYVR |
Parental | LAPDYDALDVANKIGII |
LA.DYDALDVANKIGII | |
Retrocopy | LASDYDALDVANKIGII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |