RetrogeneDB ID: | retro_amel_479 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192467.1:941928..942391(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MAPKPKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNK |
MA.K..KEAPA.P.A..KAKALKA.K.VLK...SH...KIR.SPTF.RPKTLRL.RQPKYP.KS..RRNK | |
Retrocopy | MALKAEKEAPALPRA--KAKALKARKVVLKDAQSHTQNKIRMSPTF*RPKTLRLQRQPKYP*KSTLRRNK |
Parental | LDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPD-GEKKAYVR |
.DHYAII.F.LTTESAMKK.E..NTLVFIVDVK...H.IKQAVKKLYDIDVAKVN.LIRP...EKKAYV. | |
Retrocopy | FDHYAIIRFLLTTESAMKKTEEHNTLVFIVDVKTKNHHIKQAVKKLYDIDVAKVNILIRPH>EEKKAYV* |
Parental | LAPDYDALDVANKIGII |
LAP.Y.ALDVANKIG.I | |
Retrocopy | LAPHYEALDVANKIGVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |