RetrogeneDB ID: | retro_amel_843 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192679.1:405528..405878(+) | ||
Located in intron of: | ENSAMEG00000014344 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.9 % |
Parental protein coverage: | 75. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | IRTS-PTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQ |
IRTS.PTF.RPKTL.L.RQPKYP.K..PRRNK.DHYAIIKF..TT.SAMKKIEDNNTLVF.VDVKANKHQ | |
Retrocopy | IRTS<PTFQRPKTLTLQRQPKYPQKNTPRRNKPDHYAIIKFLVTTKSAMKKIEDNNTLVFTVDVKANKHQ |
Parental | IKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII |
IKQAVKKL.D.D.AKVNTLI.P.GEK.AYV.LAPDYDALDVANKIGII | |
Retrocopy | IKQAVKKL*DTDMAKVNTLIGPNGEKAAYVQLAPDYDALDVANKIGII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |