RetrogeneDB ID: | retro_amel_1527 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193559.1:502776..503221(-) | ||
Located in intron of: | ENSAMEG00000005592 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.53 % |
Parental protein coverage: | 96.79 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYA |
KKEAPAPPKA..KAKA.KAKKA.LKG.HSHK.KKIR.SPTF.RPKTL.LRRQP.YP.K.APRRNKLDH.A | |
Retrocopy | KKEAPAPPKA--KAKAFKAKKAALKGIHSHKEKKIRMSPTFPRPKTLCLRRQPEYPPKGAPRRNKLDHCA |
Parental | IIK-FPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDY |
IIK.FP.TTESAMKKI.DNNTL.FIVDVKA.KHQIKQAVKKL.D.DVAKVNTLIRPD.EKKAYVRLAPDY | |
Retrocopy | IIK>FP-TTESAMKKIKDNNTLAFIVDVKATKHQIKQAVKKL*DTDVAKVNTLIRPDREKKAYVRLAPDY |
Parental | DALDVANKIGII |
DALDV.NKIGII | |
Retrocopy | DALDVTNKIGII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |