RetrogeneDB ID: | retro_amel_1391 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193312.1:52895..53339(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23A | ||
Ensembl ID: | ENSAMEG00000004684 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.13 % |
Parental protein coverage: | 96.79 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | KKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYA |
..E.P.PPKAEAKAKALK..K..LKG.HSH..KK..TSPTFR.PKTLRL..QPKYP.K.APRRNKLDHYA | |
Retrocopy | EEEGPTPPKAEAKAKALKTQKVLLKGIHSHREKKFHTSPTFRQPKTLRL*SQPKYP*KNAPRRNKLDHYA |
Parental | IIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYD |
I.KFPLTT..A.KKIEDNNTLVFIVDVKANK.Q.KQAVKKLY...VAK.NTLIRPDGE.KAYV.LAPDYD | |
Retrocopy | IFKFPLTTKAAIKKIEDNNTLVFIVDVKANKLQTKQAVKKLY--EVAKINTLIRPDGE-KAYV*LAPDYD |
Parental | ALDVANKIGII |
ALDVANKIGII | |
Retrocopy | ALDVANKIGII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |