RetrogeneDB ID: | retro_etel_431 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7108:109786..110298(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000015750 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSETEG00000015044 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 80.23 % |
Parental protein coverage: | 96.57 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | FHRAAAISGTLL--HGYIQELWRKKQSDVMRFL-LRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQG |
FHRAAAI.........YIQELWRKKQSD.M.FL.LRVRCWQ.RQLS.LH.A..P.RPDKA.RLGYKAK.G | |
Retrocopy | FHRAAAIK*AKMGAYQYIQELWRKKQSDLMCFL<LRVRCWQ*RQLSVLHWALCPIRPDKACRLGYKAKPG |
Parental | YVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYK |
YV.Y.IRV..GG..RPVPKG.TYGKPVHH.VNQLKFARSLQSV.EE.AG.HCGALRVLNSYW.GEDST.K | |
Retrocopy | YVTYQIRVHCGGCQRPVPKGTTYGKPVHHSVNQLKFARSLQSVTEEQAGHHCGALRVLNSYWLGEDSTHK |
Parental | FFEVILIDPFHKAIRRNPDTQWITKPVHKHRE |
FFEVILIDPFHKAIRRNPDTQWITKPVHKHR. | |
Retrocopy | FFEVILIDPFHKAIRRNPDTQWITKPVHKHRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |