RetrogeneDB ID: | retro_meug_2112 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold91723:4534..5080(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000013919 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMEUG00000014522 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 89.56 % |
Parental protein coverage: | 89.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQ |
.LRV.CWQY.QLSALHRAPRPT.PDKA.RLGYKAKQGYVIYRIRV.RGG.K..VPKGATYGKPVHHGVNQ | |
Retrocopy | MLRVHCWQYCQLSALHRAPRPT*PDKAGRLGYKAKQGYVIYRIRVLRGGQKGRVPKGATYGKPVHHGVNQ |
Parental | LKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREM |
LKFAR..QS.AEERAGRHCG.LRVLNSYWVGEDSTYKFFEVI.IDPFHKAIRRNPDTQWITKP.HKHREM | |
Retrocopy | LKFARTFQSAAEERAGRHCGVLRVLNSYWVGEDSTYKFFEVIVIDPFHKAIRRNPDTQWITKPMHKHREM |
Parental | RGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRY |
RGLTS.G.KSRGLGKGHKFHH.IG.SRRAAWRRRNTLQLHRY | |
Retrocopy | RGLTSSGWKSRGLGKGHKFHHIIGVSRRAAWRRRNTLQLHRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |