RetrogeneDB ID: | retro_tbel_1031 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3620:333573..333929(-) | ||
Located in intron of: | ENSTBEG00000011754 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSTBEG00000009843 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 76.23 % |
Parental protein coverage: | 54.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | IQELWRKK-QSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV-IYRIRVRRGGRKRP |
IQELWRKK.QSDVM.FLLRVRCWQ..QLSALHRAP.PT.PDK..RLGYKAKQ..V.IYRI.V..GG.K.P | |
Retrocopy | IQELWRKK>QSDVMHFLLRVRCWQ*HQLSALHRAPHPTWPDKVCRLGYKAKQSFV<IYRICVHCGGHKCP |
Parental | VPKGATYG-KPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDS |
VPKGATY...PVH.GVNQLKF..SLQSVA.E.AG.HCG.L.VLN..WVGEDS | |
Retrocopy | VPKGATYA<QPVHDGVNQLKFTGSLQSVAKEQAGCHCGTLKVLNLNWVGEDS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |