RetrogeneDB ID: | retro_tbel_2634 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_114842:19059..19441(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000001290 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSTBEG00000009843 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 86.72 % |
Parental protein coverage: | 58.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | YIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPV |
YIQELWRK.QSDVM.FLLRV.C.QYRQLSALHRAP.PT.PDKARRLGYKAKQGYVI.RIRV.RGGRK.PV | |
Retrocopy | YIQELWRKQQSDVMCFLLRVCCGQYRQLSALHRAPHPTWPDKARRLGYKAKQGYVIHRIRVQRGGRKCPV |
Parental | PKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNS-YWVGEDSTYKFFEV |
PKGA.Y.KPVHHG.N.LKFARSLQSV.EERAGR.CGALRVLNS.YWVGEDSTY.FFEV | |
Retrocopy | PKGAAYSKPVHHGLNLLKFARSLQSVSEERAGRYCGALRVLNS>YWVGEDSTYRFFEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |