RetrogeneDB ID: | retro_tbel_3387 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_139085:46275..46664(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSTBEG00000009843 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 89.31 % |
Parental protein coverage: | 59.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAE |
SALHRAPRPTRPDKARRLGY..KQGYVIYRIRV.RGGRKRPVPKGATY.KPV.HGVNQLKFARSLQSVAE | |
Retrocopy | SALHRAPRPTRPDKARRLGYETKQGYVIYRIRVWRGGRKRPVPKGATYSKPVRHGVNQLKFARSLQSVAE |
Parental | ERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVH-KHREMRG |
E.AGRHC.ALRVLNSYWVGE.STYKFFEVILI.PFHKAIRRN.DTQWITKPVH...REM.G | |
Retrocopy | EQAGRHCAALRVLNSYWVGEGSTYKFFEVILIYPFHKAIRRNSDTQWITKPVH<QPREMLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |