RetrogeneDB ID: | retro_tbel_1072 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3758:1113359..1113724(+) | ||
Located in intron of: | ENSTBEG00000003695 | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000004332 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSTBEG00000009843 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 82.11 % |
Parental protein coverage: | 55.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | YRQLSALHRAPR-PTRP-DKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARS |
Y.QL..LHRAP..P..P.DKA.RLGY.A..GYVIYR.RVRRGGRKRPVP.GATYGKPVHHG..QL.FARS | |
Retrocopy | YCQLLVLHRAPH>PPHPADKAHRLGYWAEHGYVIYRTRVRRGGRKRPVPEGATYGKPVHHGAKQLRFARS |
Parental | LQSVAEERAGRHCGA-LRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQ |
LQSVAEERAGR.CGA.LRVLNSYWVGE.STYKFF.VILIDPFHKAIRRNPDT. | |
Retrocopy | LQSVAEERAGRLCGA>LRVLNSYWVGEESTYKFFQVILIDPFHKAIRRNPDTR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |