RetrogeneDB ID: | retro_tbel_2110 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_100431:4262..4761(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.02 % |
Parental protein coverage: | 79.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNR |
A..MP.KF.P..IKVVYLRCTGGEV...SALAP.IGPLGLSPK.VGDDI.KATGDWK.LRITVKLTIQ.R | |
Retrocopy | ASSMPPKFNPNDIKVVYLRCTGGEVDSSSALAPRIGPLGLSPKNVGDDISKATGDWKHLRITVKLTIQKR |
Parental | QAQIEVVPSASALIIKALKEPP-RDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILGTA |
QAQIEVVP......I......P.........I.....ITFDEIVSIA.QMRH.SLARELSGTIKE.LGTA | |
Retrocopy | QAQIEVVP-SASALIIKALKEP>QETERSRRILNVVEITFDEIVSIAQQMRHQSLARELSGTIKEVLGTA |
Parental | QSVGCNVDGRHPHDIIDDINSGAVECPA |
Q.VGCNVDGRHPHD.I.DINSGAV.CPA | |
Retrocopy | QTVGCNVDGRHPHDTINDINSGAVKCPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |