RetrogeneDB ID: | retro_tbel_2886 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_122335:10627..11103(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.39 % |
Parental protein coverage: | 75.96 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | PDRVHPTADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV |
PD...P.A..M..K.DP.E..V.YLRC.GG.VGA.SAL.PKIGPLGLSPKKVGDDIA.ATGD.KGLR.T. | |
Retrocopy | PDSPTPAASTMLPKSDPNELRVMYLRCSGGKVGALSALVPKIGPLGLSPKKVGDDIARATGD*KGLRMTR |
Parental | KLTIQNRQA-QIEVVP-SASALIIKALKEPPRDRKKQKNIKHSG-NITFDEIVSIARQMRHRSLARELSG |
K.TIQ.RQ..Q.EV.P.SAS.L.IKALKEPPRDRKKQKNIK.SG..ITFDE.VSIA.QMRHRSLARELSG | |
Retrocopy | KVTIQDRQS<QTEVAP<SASVLTIKALKEPPRDRKKQKNIKRSG<DITFDEFVSIA*QMRHRSLARELSG |
Parental | TIKEILG-TAQSVGCNVDGR-HPH |
TI.E..G.TAQS.GCNVDGR.H.H | |
Retrocopy | TIRELPG<TAQSAGCNVDGR*HRH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |