RetrogeneDB ID: | retro_tbel_2815 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_119917:149607..150120(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.88 % |
Parental protein coverage: | 81.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | VHPT--ADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGP-LGLSPKKVGDDIAKATGDWKGLRITV |
VHPT.....M..KFDP..IKV.YLRCT.G.V.ATS.LAPKI.P.LGLSPK.VGDDIAKA..D...LR..V | |
Retrocopy | VHPTPATSVMQPKFDP>RIKVMYLRCTIGDVSATSVLAPKIRP<LGLSPKQVGDDIAKASSDQEVLRMIV |
Parental | KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIK |
KLTIQNRQAQ.EV.PSAS.LII.ALKEPPR..KKQKNIKHSGN.TFD.IVSIARQMRHRSLA.ELSGTIK | |
Retrocopy | KLTIQNRQAQSEVAPSASVLIIRALKEPPRKGKKQKNIKHSGNVTFDKIVSIARQMRHRSLAIELSGTIK |
Parental | EILGTAQSVGCNVDGRHPHDIIDDINSGAVECP |
EILGTA.SVG.N..GRHPHDII.DINSG.V.CP | |
Retrocopy | EILGTAPSVGSNINGRHPHDIIGDINSGTVGCP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |