RetrogeneDB ID: | retro_amel_1558 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193612.1:226017..226579(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000016712 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.72 % |
Parental protein coverage: | 96.35 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | RQRCNCLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPL--GLSPKKVGDDI |
R.RCNCL.SS.I.VH.TPA.S..PP.FDP.E.KV..LR..GGEVGA.SALAPKI.....GLSPKK.GDDI | |
Retrocopy | R*RCNCLQSSQIWVHLTPAASTIPPMFDPKETKVLCLR*IGGEVGAMSALAPKIXXXXPGLSPKKTGDDI |
Parental | AKATGDWKGLRITVK-LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQ |
AKAT.D.KGLR.T.K.LT.QNRQAQIEVVPSASAL.IKALKEPP.D.KKQKNIKHSGN.TFDEIVN.A.Q | |
Retrocopy | AKATSD*KGLRTTMK>LTAQNRQAQIEVVPSASALVIKALKEPPTDGKKQKNIKHSGNTTFDEIVNTAQQ |
Parental | MRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP |
M.HR.LA.ELSGT.KEILGTAQSVGCNVDGRHPHDIIDDIN.G.VECP | |
Retrocopy | MQHRCLA*ELSGTTKEILGTAQSVGCNVDGRHPHDIIDDINIGTVECP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |