RetrogeneDB ID: | retro_tbel_3702 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_148908:17098..17601(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.76 % |
Parental protein coverage: | 80.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PTADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQ |
P.A.....KF...EIKVVYL.CT..EV...SALAPKIGPL.LSPKKVG.DI.KATGDWKGL.ITVKL.IQ | |
Retrocopy | PAASTILFKFNTNEIKVVYLTCTNSEVSLISALAPKIGPLDLSPKKVGNDIVKATGDWKGLMITVKLSIQ |
Parental | NRQAQIEVVPSASALIIKALKEPPRD-RKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILG |
NRQAQ.E.VPSAS.LIIKALKEP.R..RKKQ.NIK.S.NITFD.IV.I.RQMRH.SL.RELSG.IKEIL. | |
Retrocopy | NRQAQTEEVPSASLLIIKALKEPTRE<RKKQ-NIKNSVNITFDKIVHISRQMRHWSLSRELSGIIKEILW |
Parental | TAQSVGCNVDGRHPHDIIDDINSGAVECPA |
TAQ.VG..VDG..PHDII..INS.....PA | |
Retrocopy | TAQFVGYSVDGHQPHDIINVINSAVMKHPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |