RetrogeneDB ID: | retro_tbel_4231 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_72657:612..1132(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.43 % |
Parental protein coverage: | 82.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RVH--PTADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV |
RVH..P.A..MP.KF.P..IKVVYLRCTGGEV...SALAP.IGPLGLSPK.VGDDI.KATGDWK.LRITV | |
Retrocopy | RVHLTPDASSMPPKFNPNDIKVVYLRCTGGEVDSSSALAPRIGPLGLSPKNVGDDISKATGDWKHLRITV |
Parental | KLTIQNRQAQIEVVPSASALIIKALKEPP-RDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTI |
KLTIQ.RQAQIEVVP......I......P.........I.....ITFDEIVSIA.QMRH.SLARELSGTI | |
Retrocopy | KLTIQKRQAQIEVVP-SASALIIKALKEP>QETERSRRILNVVEITFDEIVSIAQQMRHQSLARELSGTI |
Parental | KEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPA |
KE.LGTAQ.VGCNVDGRHPHD.I.DINSGAV.CPA | |
Retrocopy | KEVLGTAQTVGCNVDGRHPHDTINDINSGAVKCPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |