RetrogeneDB ID: | retro_tbel_4679 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_97615:53032..53537(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.53 % |
Parental protein coverage: | 80.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PTADIMPTKFDP-EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQ |
P.A..MP.KF.P..IKVVYLRCTGGEVGA.SALAP.IGPLGLSPK.VGDDI.KATGDWK.LRITVKLTIQ | |
Retrocopy | PAASSMPPKFNPNDIKVVYLRCTGGEVGASSALAPRIGPLGLSPKNVGDDISKATGDWKHLRITVKLTIQ |
Parental | NRQAQIEVVPSASALIIKALKEPP-RDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILG |
NRQAQIEVVP......I......P.........I.....ITFDEIVSIA.QMRH.SLARELSGTIKE.LG | |
Retrocopy | NRQAQIEVVP-SASALIIKALKEP>QETERSRRILNVVEITFDEIVSIAQQMRHQSLARELSGTIKEVLG |
Parental | TAQSVGCNVDGRHPHDIIDDINSGAVECPA |
T.QSVGCNVDGRHPHD.I.DINSGAV.CPA | |
Retrocopy | TPQSVGCNVDGRHPHDTINDINSGAVKCPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |