RetrogeneDB ID: | retro_tbel_3972 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_46948:814..1161(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.12 % |
Parental protein coverage: | 56.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KFDPEIKVVYLRCT-GGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEV |
..DP.IKV.YLRCT..G.V.A.S...PKIGPLGLSP.KV.DDIAKAT.DWKGLRITVKLTIQN.QAQI.. | |
Retrocopy | QIDPQIKVMYLRCT<SGKVSAMSGPGPKIGPLGLSPEKVVDDIAKATSDWKGLRITVKLTIQNGQAQIKA |
Parental | VPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVSIARQMRHRSL |
VPS.SALIIKALK.PPR.RKKQ.NIKHSGNITFD.IVS.A.QMRH.S. | |
Retrocopy | VPSVSALIIKALKKPPRIRKKQ-NIKHSGNITFDKIVSLA*QMRHWSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |