RetrogeneDB ID: | retro_tbel_3911 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_3516:11146..11587(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.52 % |
Parental protein coverage: | 71.63 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | LRCTGGEVGATSALAPKI-GPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIK |
.RCT...VGAT.AL.PK..GPL..SPKKVGDDI...T..W..L.I.VK...Q.........PSASALI.K | |
Retrocopy | IRCTDQGVGATPALVPKT<GPLCQSPKKVGDDITNTTDSWESLKIRVKPAFQKG*LRL-MAPSASALIMK |
Parental | ALKEPPRDRKKQKNIKHSGNITFDEIVSIARQM-RHRSLARELSGTIKEIL-GTAQSVGCNVDGR-HPHD |
A.KEPPRDRKKQ.NI.HSGN.T.DE.V.IARQM..H.S.ARE.SGT..E....TAQ....NVD.....HD | |
Retrocopy | AFKEPPRDRKKQ-NIRHSGNSTPDEKVNIARQM<GHCSSAREPSGTTEELRPRTAQLEDSNVDSS<RAHD |
Parental | IIDDINSGAVECP |
..DD.NSG.V..P | |
Retrocopy | SVDDTNSGTVQYP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |