RetrogeneDB ID: | retro_amel_260 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192369.1:1570641..1571086(+) | ||
Located in intron of: | ENSAMEG00000002353 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000016712 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.83 % |
Parental protein coverage: | 77.6 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PKFDPNEIKVVYLRCT-GGEVGATSA-LAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQ |
PKF.PNEI.V..LR.T.GGE.GATSA..APK.GPLG.SP.KV..DIA...GD.KGLR.TV.LTIQ.RQAQ | |
Retrocopy | PKFNPNEIQVLHLRYT<GGEAGATSA<WAPKTGPLGPSPNKVSEDIA*VSGDCKGLRRTVTLTIQDRQAQ |
Parental | IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVG |
.E..PSASALII.AL.EPPRDRKKQKN..HSGNITF.E.VNIA.Q.RH.SLARELSGTI.EILGTAQSVG | |
Retrocopy | TELAPSASALIIEALNEPPRDRKKQKNLNHSGNITFEETVNIAPQKRHASLARELSGTIQEILGTAQSVG |
Parental | CNVDGRHPHDI |
C..DGRH.HD. | |
Retrocopy | CSDDGRHLHDL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |