RetrogeneDB ID: | retro_amel_1208 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193043.1:817987..818541(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000009304 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000016712 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.2 % |
Parental protein coverage: | 98.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LSARRRQRCNCLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKI-GPLGLSPKKV |
L.A....RC.C..SS.I....T.A.S.M.P.FD....KV.YLR.T.GEVGATSALA.K..G.LGLSPK.. | |
Retrocopy | LLAGEWRRCLCPWSSVIWLIDTSA-STMLPNFDLDRMKVIYLRRTRGEVGATSALAGKM<GRLGLSPKTF |
Parental | GDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNI |
GDDIAKATGDWKGL........QNRQAQIEVVPSASA.I.KAL.E..R.RKKQKNIKHS.N.TFDEIVNI | |
Retrocopy | GDDIAKATGDWKGL----RINHQNRQAQIEVVPSASAPISKALTELSRGRKKQKNIKHSRNTTFDEIVNI |
Parental | ARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP |
A..M.HRSL.RELS.TIKEILGTAQSVGCNVDG.HPHDIIDDIN.G.VECP | |
Retrocopy | ALKMQHRSLPRELSRTIKEILGTAQSVGCNVDGCHPHDIIDDINCGEVECP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |