RetrogeneDB ID: | retro_amel_876 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192704.1:1247833..1248406(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000016712 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.38 % |
Parental protein coverage: | 98.96 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | SARRRQRCNCLRSSRI--RVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKV |
S..RR..C..L.SS.I....H.TPAT.A..P.F.PN..K.V.LR..GG.V.A.S.LAP.I.PLG....KV | |
Retrocopy | STWRRPTCDRLWSSCICCPAHQTPATPAFLPRFNPNKSKAVNLRSAGGGVRARSTLAPHIDPLGPALIKV |
Parental | GDDIAKATGDWKGLRITVKLTIQNRQA-QIEVVPSA-SALIIKALKEPPRDRKKQKNIKHSGNITFDEIV |
G.D.AK...DWK.LR....LTIQNRQ..QIEVV.SA..ALIIKA...PPR.RK.Q.N.KHS.N.TF..I. | |
Retrocopy | GNDLAKKPSDWKDLRMMGRLTIQNRQI<QIEVVLSA<PALIIKAHQGPPRERKEQ-NMKHSRNHTFVGII |
Parental | NIARQMRHRSLARELSGTIKEI--LGTAQSVGCNVDGRH-PHDIIDDINSGAVECPA |
.IARQ.R...L..ELSGT.K.I..LG..Q.VGC..DG.H.PHDII.D..SGAVECPA | |
Retrocopy | HIARQVRYGDL-*ELSGTVKQILRLGPVQFVGCKADGCH<PHDIIGDLSSGAVECPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |