RetrogeneDB ID: | retro_tsyr_1296 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_3856:37650..37960(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRPL42 | ||
Ensembl ID: | ENSTSYG00000006370 | ||
Aliases: | None | ||
Description: | mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:14493] |
Percent Identity: | 76.92 % |
Parental protein coverage: | 87.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LYCVCHKSTYSPLPDDYNCKVELALTSDGRTIVCYHPSVDI-PYEHTRPIPRPDPVHNNEETHDQVLKAR |
LYCVC.KSTYSPLPDDYNCKVELAL.SDGR.I.CY.PSVDI..YEH.RPIP.P..VHN.EETHDQVLK.. | |
Retrocopy | LYCVCYKSTYSPLPDDYNCKVELALMSDGRKIMCYPPSVDI>LYEHMRPIPSPYSVHNSEETHDQVLKVK |
Parental | LEEKSGHLEQGPMIEQLSKMFFTTKHRWYPRGQY |
.EEK.GH.EQGPMIE.LSKMFF.TKH..Y..G.Y | |
Retrocopy | *EEKGGHFEQGPMIEHLSKMFFATKHHRYAQGRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |