RetrogeneDB ID: | retro_itri_1793 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393790.1:142999..143272(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000026544 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.82 % |
Parental protein coverage: | 64.08 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ELALTSDGRTIVCYHPSVDIPYEHTQPIPQPDPLHNNEETHDQVLKTRLEEKDEHLEEGPMIEKLSKMFF |
EL.LTSDGRTIVCY..S.DIPYE..QPIPQ.DP.HNNEET.DQVLK.RLEEK.EHLE.GP.IEKLSKM.F | |
Retrocopy | ELVLTSDGRTIVCYNLSGDIPYEQRQPIPQTDPVHNNEETLDQVLKSRLEEKCEHLEKGPLIEKLSKMLF |
Parental | TTKHRWYPHGQYHRRRKNPNP |
.TK...YPH.QYHR..KN.NP | |
Retrocopy | ITKPQ*YPHEQYHRHCKNTNP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |