RetrogeneDB ID: | retro_itri_1285 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393428.1:2887210..2887558(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000026544 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.33 % |
Parental protein coverage: | 82.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | ALSGVCHKSTFSSLPDDYNCKVELALTSDGRTIVCYHPSVDIPYEHTQPIPQPDPLHNNEETHDQVLKTR |
ALSGVCHK.TFS.LP.D.NCK.ELALT.DGR..VCY.PSV..PYEHTQPIPQPDP.HNNEETHDQVLKTR | |
Retrocopy | ALSGVCHKFTFSFLPED*NCKIELALTVDGRIVVCYYPSVNRPYEHTQPIPQPDPVHNNEETHDQVLKTR |
Parental | LEEK-DEHLEEGP-MIEKLSKMFFTTKHRWYPHGQYHRRRKN-PNPPKDR |
LEEK.DEHLE.GP.MIE.LS...FT.KHRWYPHG.YHR...N..NPPKDR | |
Retrocopy | LEEK<DEHLEQGP<MIEELSNVLFTNKHRWYPHGHYHRCCEN<LNPPKDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |