Parental gene: | ENSSTOG00000026544 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393317.1:9922446..9941835(+) |
>ENSSTOG00000026544
ATGGCATCGATAGCATTCAAATGGGTGATGTCAAAGAGAATTCTCTGGAAGCATTTATTTCCAGTTCAAAACAGTGCTTT
ATCTGGTGTTTGTCATAAATCCACATTTTCTTCTCTTCCAGATGACTATAATTGCAAAGTAGAGCTTGCTTTGACATCTG
ATGGCAGGACAATAGTATGCTACCATCCTTCTGTGGATATCCCATATGAACATACACAACCTATTCCTCAACCAGATCCT
TTGCACAATAATGAAGAAACACATGATCAAGTGCTAAAAACCAGATTAGAAGAAAAAGATGAACACCTTGAGGAAGGACC
CATGATAGAAAAACTTAGTAAAATGTTCTTTACTACTAAGCATCGTTGGTATCCTCATGGACAGTATCATAGACGTCGTA
AGAATCCGAATCCTCCAAAAGACAGA
ATGGCATCGATAGCATTCAAATGGGTGATGTCAAAGAGAATTCTCTGGAAGCATTTATTTCCAGTTCAAAACAGTGCTTT
ATCTGGTGTTTGTCATAAATCCACATTTTCTTCTCTTCCAGATGACTATAATTGCAAAGTAGAGCTTGCTTTGACATCTG
ATGGCAGGACAATAGTATGCTACCATCCTTCTGTGGATATCCCATATGAACATACACAACCTATTCCTCAACCAGATCCT
TTGCACAATAATGAAGAAACACATGATCAAGTGCTAAAAACCAGATTAGAAGAAAAAGATGAACACCTTGAGGAAGGACC
CATGATAGAAAAACTTAGTAAAATGTTCTTTACTACTAAGCATCGTTGGTATCCTCATGGACAGTATCATAGACGTCGTA
AGAATCCGAATCCTCCAAAAGACAGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009832 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000002708 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000032825 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000198015 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022760 | ortholog_one2many | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000013779 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016805 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000062981 | possible_ortholog | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005699 | ortholog_one2many | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010928 | ortholog_one2many | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000010967 | ortholog_one2many | 5 retrogenes | |
| Procavia capensis | ENSPCAG00000003791 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004833 | ortholog_one2many | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000022791 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042740 | possible_ortholog | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000030478 | ortholog_one2many | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006370 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003312 | ortholog_one2many | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000007658 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_268 | 78.01 | 99.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_284 | 66.39 | 82.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_393 | 51.85 | 55.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_558 | 67.86 | 78.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_itri_899 | 77.42 | 65.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_itri_1020 | 77.27 | 75.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_itri_1132 | 72.73 | 84.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_itri_1266 | 68.63 | 69.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_itri_1285 | 78.33 | 82.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_itri_1353 | 50.34 | 98.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_itri_1695 | 61.02 | 81.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_itri_1793 | 75.82 | 64.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000026544 retrocopies