RetrogeneDB ID: | retro_tsyr_23 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_208003:746..1427(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000013934 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1E1 | ||
Ensembl ID: | ENSTSYG00000010679 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857] |
Percent Identity: | 78.62 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKI |
MALSD.D.QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKI.EYYEKKEKQIEQQK.I | |
Retrocopy | MALSDIDIQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKILEYYEKKEKQIEQQKRI |
Parental | QMSNLMNQARLKVLRARDDLISDLLNEAKQRLSKVVKDATRYQVLLDGLVLQGLYQLLEPRMIVRCRKQD |
QMS...NQARLKVLRA.DDLIS.LL...K.RL.K...D...YQ.LLD.LVLQ.L..LLEP..IVRCR.QD | |
Retrocopy | QMSTMRNQARLKVLRAQDDLISELLSDIKLRLHKIMEDPEIYQGLLDKLVLQALLRLLEPVVIVRCRPQD |
Parental | FPLVK |
..LV. | |
Retrocopy | LSLVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |